FastQCFastQC Report
Tue 8 Oct 2019
Sample-1_S174_L001_R1_001.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSample-1_S174_L001_R1_001.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103035
Sequences flagged as poor quality0
Sequence length35-300
%GC53

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)